Onion

Documentation for Onion.

Installation

using Pkg
pkg"registry add https://github.com/MurrellGroup/MurrellGroupRegistry"
pkg"add Onion"

Contents

• Onion
• • Installation
  • Contents
  • Index
• API Reference

Index

• Onion.AdaAffine
• Onion.AdaLN
• Onion.AngleResnet
• Onion.AngleResnetBlock
• Onion.Attention
• Onion.AttentionPairBias
• Onion.BGTriangleMultiplication
• Onion.BackboneUpdate
• Onion.BlockLinear
• Onion.CrossFrameIPA
• Onion.DART
• Onion.Derf
• Onion.DyT
• Onion.ESMFoldAttention
• Onion.ESMFoldIPA
• Onion.FoldingTrunk
• Onion.Framemover
• Onion.GeneralizedHyperConnection
• Onion.IPAblock
• Onion.L2Norm
• Onion.LayerNorm
• Onion.Linear
• Onion.LpNorm
• Onion.MiniTriangularUpdate
• Onion.MiniformerLayer
• Onion.MiniformerNoSeqLayer
• Onion.Modulator
• Onion.MultidimRoPE
• Onion.MultimerInvariantPointAttention
• Onion.OuterProductMean
• Onion.PairToSequence
• Onion.PairWeightedAveraging
• Onion.PairformerLayer
• Onion.PairformerModule
• Onion.PairformerNoSeqLayer
• Onion.PointProjection
• Onion.PointProjectionMultimer
• Onion.RMSNorm
• Onion.RelativePosition
• Onion.ResidueMLP
• Onion.RoPE
• Onion.STRINGRoPE
• Onion.SequenceToPair
• Onion.StarGLU
• Onion.StructureModule
• Onion.TransformerBlock
• Onion.Transition
• Onion.TriangleAttention
• Onion.TriangleMultiplicativeUpdate
• Onion.TriangularSelfAttentionBlock
• Onion.With
• Onion.VirtualWidthNetwork
• Onion.attention
• Onion.combine_projections
• Onion.cross_att_padding_mask
• Onion.distogram
• Onion.falses_like
• Onion.glut
• Onion.layer_norm
• Onion.like
• Onion.like
• Onion.linear
• Onion.newton_schulz
• Onion.ofeltype
• Onion.ones_like
• Onion.rms_norm
• Onion.rotary_pos_emb
• Onion.self_att_padding_mask
• Onion.softmax
• Onion.trues_like
• Onion.zeros_like
• Onion.@lazy