FastAlign Help
Selection Click to select. Shift+Click to extend selection.
Editing Type [A-Z] to overwrite. Space to insert gap. Backspace to delete.
Align Selection Aligns rows inside selection box. Uses Ref if selected, else longest seq.
Set Reference Right-click a sequence name.
Move Block Drag selection horizontally to shift sequences.
Align Aligns all sequences. Supports Left, Polish, or Discard insertions modes.
IUPAC Full IUPAC ambiguity codes supported in Nucleotide view.
Export Download or Copy current view (NT or AA) as FASTA.